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24 #ifndef __FINLEY_ASSEMBLE_H__
25 #define __FINLEY_ASSEMBLE_H__
30 #include <escript/AbstractSystemMatrix.h>
87 template<
typename Scalar>
97 template<
typename Scalar>
103 template<
typename Scalar>
109 template<
typename Scalar>
118 template<
typename Scalar>
124 template<
typename Scalar>
130 template<
typename Scalar>
134 template<
typename Scalar =
double>
136 const index_t* Nodes_Equa,
int num_Equa,
int NN_Sol,
144 template<
typename Scalar>
149 template<
typename Scalar>
154 template<
typename Scalar>
172 template<
typename Scalar>
177 template<
typename Scalar>
182 template<
typename Scalar>
187 const double* QuadWeights,
int numShape,
189 const double* DSDv,
int numTest,
const double* DTDv,
190 double* dTdX,
double* volume,
const index_t* elementId);
193 const double* QuadWeights,
int numShape,
195 const double* DSDv,
int numTest,
const double* DTDv,
196 double* dTdX,
double* volume,
const index_t* elementId);
199 const double* QuadWeights,
int numShape,
201 const double* DSDv,
int numTest,
const double* DTDv,
202 double* dTdX,
double* volume,
const index_t* elementId);
205 const double* QuadWeights,
int numShape,
207 const double* DSDv,
int numTest,
const double* DTDv,
208 double* dTdX,
double* volume,
const index_t* elementId);
211 const double* QuadWeights,
int numShape,
213 const double* DSDv,
int numTest,
const double* DTDv,
214 double* dTdX,
double* volume,
const index_t* elementId);
217 const double* QuadWeights,
int numShape,
219 const double* DSDv,
int numTest,
const double* DTDv,
220 double* dTdX,
double* volume,
const index_t* elementId);
223 const double* QuadWeights,
int numShape,
225 const double* DSDv,
int numTest,
const double* DTDv,
226 double* dTdX,
double* volume,
const index_t* elementId);
229 const double* QuadWeights,
int numShape,
231 const double* DSDv,
int numTest,
const double* DTDv,
232 double* dTdX,
double* volume,
const index_t* elementId);
235 const double* QuadWeights,
int numShape,
237 const double* DSDv,
int numTest,
const double* DTDv,
238 double* dTdX,
double* volume,
const index_t* elementId);
241 const double* QuadWeights,
int numShape,
243 const double* DSDv,
int numTest,
const double* DTDv,
244 double* dTdX,
double* volume,
const index_t* elementId);
247 const double* QuadWeights,
int numShape,
249 const double* DSDv,
int numTest,
const double* DTDv,
250 double* dTdX,
double* volume,
const index_t* elementId);
254 #endif // __FINLEY_ASSEMBLE_H__
void Assemble_jacobians_3D_M2D_E2D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:680
void Assemble_NodeCoordinates(const NodeFile *nodes, escript::Data &x)
copies node coordinates into expanded Data object x
Definition: finley/src/Assemble_NodeCoordinates.cpp:52
int NN
leading dimension of element node table
Definition: finley/src/Assemble.h:93
int numDim
number of spatial dimensions
Definition: finley/src/Assemble.h:91
void Assemble_PDE_Points(const AssembleParameters &p, const escript::Data &d_dirac, const escript::Data &y_dirac)
Definition: finley/src/Assemble_PDE_Points.cpp:74
void Assemble_integrate(const NodeFile *nodes, const ElementFile *elements, const escript::Data &data, Scalar *integrals)
integrates data on quadrature points
Definition: finley/src/Assemble_integrate.cpp:52
escript::Data & F
right-hand side to be updated
Definition: finley/src/Assemble.h:81
void Assemble_AverageElementData(const ElementFile *elements, escript::Data &out, const escript::Data &in)
averages data
Definition: finley/src/Assemble_AverageElementData.cpp:51
int col_numShapes
Definition: finley/src/Assemble.h:110
Definition: finley/src/ElementFile.h:42
dim_t numElements
number of elements
Definition: finley/src/Assemble.h:95
void Assemble_jacobians_2D_M1D_E1D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:154
ElementFile_Jacobians * col_jac
Definition: finley/src/Assemble.h:107
void Assemble_jacobians_1D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:64
index_t row_DOF_UpperBound
Definition: finley/src/Assemble.h:99
int row_numShapes
Definition: finley/src/Assemble.h:103
void Assemble_PDE_System_2D(const AssembleParameters &p, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: finley/src/Assemble_PDE_System_2D.cpp:84
void Assemble_jacobians_3D_M2D_E2D_C(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:747
void Assemble_interpolate(const NodeFile *nodes, const ElementFile *elements, const escript::Data &data, escript::Data &output)
interpolates nodal data in a data array onto elements (=integration points)
Definition: finley/src/Assemble_interpolate.cpp:53
void Assemble_PDE_Single_2D(const AssembleParameters &p, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: finley/src/Assemble_PDE_Single_2D.cpp:78
int row_numShapesTotal
Definition: finley/src/Assemble.h:102
escript::ASM_ptr S
system matrix to be updated
Definition: finley/src/Assemble.h:79
const index_t * col_DOF
Definition: finley/src/Assemble.h:105
void Assemble_jacobians_3D_M2D_E3D_C(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:547
index_t col_DOF_UpperBound
Definition: finley/src/Assemble.h:106
void Assemble_jacobians_3D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:390
Data represents a collection of datapoints.
Definition: Data.h:64
int numSides
number of sides
Definition: finley/src/Assemble.h:87
void Assemble_CopyElementData(const ElementFile *elements, escript::Data &out, const escript::Data &in)
copies data between different types of elements
Definition: finley/src/Assemble_CopyElementData.cpp:49
index_t dim_t
Definition: DataTypes.h:93
const int * col_node
Definition: finley/src/Assemble.h:108
int numComp
Definition: finley/src/Assemble.h:104
void Assemble_jacobians_3D_M2D_E3D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:466
void Assemble_addToSystemMatrix(escript::ASM_ptr S, int NN_Equa, const index_t *Nodes_Equa, int num_Equa, int NN_Sol, const index_t *Nodes_Sol, int num_Sol, const Scalar *array)
int numQuadTotal
total number of quadrature nodes = numQuadSub * numQuadSub
Definition: finley/src/Assemble.h:83
void Assemble_jacobians_2D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:101
void Assemble_getSize(const NodeFile *nodes, const ElementFile *elements, escript::Data &size)
Definition: finley/src/Assemble_getSize.cpp:52
Definition: finley/src/Assemble.h:52
void Assemble_PDE_System_C(const AssembleParameters &p, const escript::Data &D, const escript::Data &Y)
Definition: Assemble_PDE_System_C.cpp:72
int numSub
number of sub-elements
Definition: finley/src/Assemble.h:89
void Assemble_gradient(const NodeFile *nodes, const ElementFile *elements, escript::Data &gradient, const escript::Data &data)
Definition: finley/src/Assemble_gradient.cpp:53
const ElementFile * elements
element file these parameters apply to
Definition: finley/src/Assemble.h:77
ElementFile_Jacobians * row_jac
Definition: finley/src/Assemble.h:100
void Assemble_LumpedSystem(const NodeFile *nodes, const ElementFile *elements, escript::Data &lumpedMat, const escript::Data &D, bool useHRZ)
Definition: finley/src/Assemble_LumpedSystem.cpp:58
int index_t
type for array/matrix indices used both globally and on each rank
Definition: DataTypes.h:88
Definition: finley/src/NodeFile.h:41
void Assemble_PDE_System_3D(const AssembleParameters &p, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: finley/src/Assemble_PDE_System_3D.cpp:84
void Assemble_jacobians_2D_M1D_E2D(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:260
void Assemble_PDE(const NodeFile *nodes, const ElementFile *elements, escript::ASM_ptr S, escript::Data &F, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: finley/src/Assemble_PDE.cpp:128
const int * row_node
Definition: finley/src/Assemble.h:101
AssembleParameters(const NodeFile *nodes, const ElementFile *ef, escript::ASM_ptr sm, escript::Data &rhs, bool reducedOrder)
Definition: finley/src/Assemble_getAssembleParameters.cpp:34
Definition: finley/src/ElementFile.h:76
void Assemble_jacobians_2D_M1D_E1D_C(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:200
const index_t * row_DOF
Definition: finley/src/Assemble.h:98
void Assemble_getNormal(const NodeFile *nodes, const ElementFile *elements, escript::Data &normals)
calculates the normal vector at quadrature points on face elements
Definition: finley/src/Assemble_getNormal.cpp:52
void Assemble_PDE_Single_C(const AssembleParameters &p, const escript::Data &D, const escript::Data &Y)
Definition: Assemble_PDE_Single_C.cpp:70
#define S(_J_, _I_)
Definition: ShapeFunctions.cpp:140
void Assemble_jacobians_2D_M1D_E2D_C(const double *coordinates, int numQuad, const double *QuadWeights, int numShape, dim_t numElements, int numNodes, const index_t *nodes, const double *DSDv, int numTest, const double *DTDv, double *dTdX, double *volume, const index_t *elementId)
Definition: finley/src/Assemble_jacobians.cpp:314
boost::shared_ptr< AbstractSystemMatrix > ASM_ptr
Definition: AbstractSystemMatrix.h:47
int numQuadSub
number of quadrature nodes per subelements
Definition: finley/src/Assemble.h:85
void Assemble_CopyNodalData(const NodeFile *nodes, escript::Data &out, const escript::Data &in)
copies data between different types of nodal representations
Definition: finley/src/Assemble_CopyNodalData.cpp:41
Data Scalar(double value, const FunctionSpace &what, bool expanded)
A collection of factory functions for creating Data objects which contain data points of various shap...
Definition: DataFactory.cpp:63
int numEqu
Definition: finley/src/Assemble.h:97
A suite of factory methods for creating various finley domains.
Definition: finley/src/Assemble.h:32
void Assemble_PDE_System_1D(const AssembleParameters &p, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: Assemble_PDE_System_1D.cpp:84
int col_numShapesTotal
Definition: finley/src/Assemble.h:109
void Assemble_PDE_Single_3D(const AssembleParameters &p, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: finley/src/Assemble_PDE_Single_3D.cpp:78
void Assemble_PDE_Single_1D(const AssembleParameters &p, const escript::Data &A, const escript::Data &B, const escript::Data &C, const escript::Data &D, const escript::Data &X, const escript::Data &Y)
Definition: Assemble_PDE_Single_1D.cpp:78